Publications: Papers, Divulgation, Books and Chapters, Ph.D. Thesis

see also - Page with reports about our work - see all publication lists at the Curriculla vitae of Fabrício R. Santos and Romeu C. Guimarães

Papers

LOPES et al 2018. The striking polyphyly of Suiriri : Convergent evolution and social mimicry in two cryptic Neotropical birds. JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH, v. 56, p. 12200 - PDF

SOARES et al 2017. Comparison of reproductive output of hybrid sea turtles and parental species. Marine Biology (Berlin), v. 164, p. 9 - PDF

NAGLE et al 2017 Aboriginal Australian mitochondrial genome variation - an increased understanding of population antiquity and diversity. Scientific Reports, v. 7, p. 43041 - PDF

CLOZATO et al 2017 Population structure and genetic diversity of the giant anteater (Myrmecophaga tridactyla: Myrmecophagidae, Pilosa) in Brazil. GENETICS AND MOLECULAR BIOLOGY (ONLINE VERSION), v. 40, p. 50-60 - PDF

DIAS et al 2017 Biogeographic scenarios for the diversification of a widespread Neotropical species, Glossophaga soricina (Chiroptera: Phyllostomidae). SYSTEMATICS AND BIODIVERSITY, v. 15, p. 440-450 - PDF

COIMBRA et al 2017 Phylogeographic history of South American populations of the silky anteater Cyclopes didactylus (Pilosa: Cyclopedidae). GENETICS AND MOLECULAR BIOLOGY (ONLINE VERSION), v. 40, p. 40-49 - PDF

RAMOS et al 2017 Population genetics and distribution data reveal conservation concerns to the sky island endemic Pithecopus megacephalus (Anura, Phyllomedusidae). CONSERVATION GENETICS, p. 1013-z - PDF

MAIA et al 2017 DNA sampling from eggshells and microsatellite genotyping in rare tropical birds: Case study on Brazilian Merganser. GENETICS AND MOLECULAR BIOLOGY, v. 40, p. 808-812 - PDF

TRUJILLO-ARIAS et al 2017 The niche and phylogeography of a passerine reveal the history of biological diversification between the Andean and the Atlantic forests. MOLECULAR PHYLOGENETICS AND EVOLUTION, v. 112, p. 107-121 - PDF

SCHETINO et al 2017 Time scaled phylogeography and demography of Bradypus torquatus (Pilosa: Bradypodidae). GLOBAL ECOLOGY AND CONSERVATION, v. 11, p. 224-235 - PDF

MAGALHÃES et al 2017 Evolutionarily significant units of the critically endangered leaf frog Pithecopus ayeaye (Anura, Phyllomedusidae) are not effectively preserved by the Brazilian protected areas network. Ecology and Evolution, v. 7, p. 8812-8828 - PDF

MIRANDA et al 2017 Taxonomic review of the genus Cyclopes Gray, 1821 (Xenarthra: Pilosa), with the revalidation and description of new species. ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, v. 182, p. zlx079 - PDF

VARGAS et al 2017 Revisiting the genetic diversity and population structure of the critically endangered leatherback turtles in the South-west Atlantic Ocean: insights for species conservation. JOURNAL OF THE MARINE BIOLOGICAL ASSOCIATION OF THE UNITED KINGDOM, v. 98, p. 1-11 - PDF

BALANOVSKY et al 2017 Genetic differentiation between upland and lowland populations shapes the Y-chromosomal landscape of West Asia.. HUMAN GENETICS, v. 136, p. 437-450 - PDF

NAGLE et al 2016 Antiquity and diversity of aboriginal Australian Y-chromosomes. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY, v. 159, p. 367-381 - PDF

PINHEIRO et al 2016 Trade-offs and resource breadth processes as drivers of performance and specificity in a host-parasite system: a new integrative hypothesis. International Journal for Parasitology, v. 46, p. 115-121 - PDF

GREGORIN et al 2016 A new species of Eumops (Chiroptera: Molossidae) from southeastern Brazil and Bolivia. Mammalian Biology (Print), v. 81, p. 235-246 - PDF

VARGAS et al 2016 Phylogeography, Genetic Diversity, and Management Units of Hawksbill Turtles in the Indo-Pacific. Journal of Heredity, v. 107, p. 199-213 - PDF

VASCONCELOS et al 2016 Chapéus e gravatas: o problema toponímico de ?Morro do Chapéu? no estudo da distribuição de beija-flores-de-gravata (Trochilidae: Augastes) na Cadeia do Espinhaço. Atualidades Ornitológicas (Online), v. 190, p. 24-25 - PDF

JOTA et al 2016 New native South American Y chromosome lineages. JOURNAL OF HUMAN GENETICS, v. 61, p. 593-603 - PDF

NAGLE et al 2016 Mitochondrial DNA diversity of present-day Aboriginal Australians and implications for human evolution in Oceania. JOURNAL OF HUMAN GENETICS, v. 62, p. 342-353 - PDF

SANDOVAL et al 2016 The Genetic History of Peruvian Quechua-Lamistas and Chankas: Uniparental DNA Patterns among Autochthonous Amazonian and Andean Populations. ANNALS OF HUMAN GENETICS - PDF

MORAS et al 2016 Reassessment of the evolutionary relationships within the dog-faced bats, genus Cynomops (Chiroptera: Molossidae). ZOOLOGICA SCRIPTA, v. 45 - PDF

DANTAS et al 2015 Population genetic structure of the Atlantic Forest endemic Conopophaga lineata (Passeriformes: Conopophagidae) reveals a contact zone in the Atlantic Forest. Journal of Ornithology, v. 156, p. 85-99 - PDF

ARUNKUMAR et al 2015  Genome-wide signatures of male-mediated migration shaping the Indian gene pool. Journal of Human Genetics (Print), p. 2015/51 - PDF

SANTOS-JUNIOR et al 2015  Hitting an Unintended Target: Phylogeography of Bombus brasiliensis Lepeletier, 1836 and the First New Brazilian Bumblebee Species in a Century (Hymenoptera: Apidae). Plos One, v. 10, p. e0125847 - PDF

FEHREN-SCHMITZ et al 2015 A Re-Appraisal of the Early Andean Human Remains from Lauricocha in Peru. Plos One, v. 10, p. e0127141 - PDF

CHAVES et al 2015 Barcoding Neotropical birds: assessing the impact of nonmonophyly in a highly diverse group. Molecular Ecology Resources, v. 15, p. 921-931 - PDF

LAVINIA et al 2015 Continental-scale analysis reveals deep diversification within the polytypic Red-crowned Ant Tanager (Habia rubica, Cardinalidae). Molecular Phylogenetics and Evolution (Print), v. 89, p. 182-193 - PDF

KUSHNIAREVICH et al 2015 Genetic Heritage of the Balto-Slavic Speaking Populations: A Synthesis of Autosomal, Mitochondrial and Y-Chromosomal Data. PLoS One, v. 10, p. e0135820 - PDF

BENN TORRES et al 2015  Genographic Consortium . Genetic Diversity in the Lesser Antilles and Its Implications for the Settlement of the Caribbean Basin. PLoS One, v. 10, p. e0139192 - PDF

MARTINEZ-CRUZ et al 2015 The Genographic Consortium . Origins, admixture and founder lineages in European Roma. European Journal of Human Genetics, v. 24, p. 937-943 - PDF

ARUNKUMAR et al 2015 A late Neolithic expansion of Y chromosomal haplogroup O2a1-M95 from east to west. Journal of Systematics and Evolution, v. 53, p. 540-560 - PDF

DE AZEVEDO et al 2015  Ancient remains and the first peopling of the Americas: Reassessing the Hoyo Negro skull. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY, v. 158 - PDF

CHAVES et al. 2015 Biogeographic patterns, origin and speciation of the endemic birds from eastern Brazilian mountaintops: a review. Systematics and Biodiversity, v. 13, p. 1-16 – PDF

BORTOLINI et al. 2014 Reconciling pre-Columbian settlement hypotheses requires integrative, multidisciplinary, and model-bound approaches. Proceedings of the National Academy of Sciences of the United States of America, v. 111, p. E213-E214 - PDF


DER SARKISSIAN et al. 2014  Mitochondrial Genome Sequencing in Mesolithic North East Europe Unearths a New Sub-Clade within the Broadly Distributed Human Haplogroup C1. Plos One, v. 9, p. e87612 – PDF

CLOZATO et al. 2014 Historical and non-invasive samples: a study case of genotyping errors in newly isolated microsatellites for the lesser anteater (Tamandua tetradactyla L., Pilosa). Molecular Ecology Resources (Print), v. 14, p. 531-540 – PDF


ELHAIK et al. 2014 Geographic population structure analysis of worldwide human populations infers their biogeographical origins. Nature Communications, v. 5, p. 3513 – PDF

LEAL et al. 2014 Isolation and characterization of microsatellite markers for the endangered Comanthera elegans (Eriocaulaceae) and cross-species amplification within the family. Biochemical Systematics and Ecology, v. 55, p. 305-309 – PDF

VILAR et al. 2014 Genetic diversity in Puerto Rico and its implications for the peopling of the Island and the West Indies. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY, v. 155, p. 352-368 – PDF

COZZUOL et al. 2014  How much evidence is enough evidence for a new species?. Journal of Mammalogy (Print), v. 95, p. 899-905 – PDF

CHAVES et al. 2014 An Online mtDNA Tool for Identification of Neotropical Psittacid Species and Taxonomic Issues: A Study Case of the Amazona ochrocephala Complex. Natural Resources, v. 05, p. 634-652 – PDF

MAGALHAES et al. 2014  Strong spatial structure, Pliocene diversification and cryptic diversity in the Neotropical dry forest spider Sicarius cariri. Molecular Ecology (Print), v. 23, p. 5323-5336 – PDF

JOTA e SANTOS 2014 A contribuição dos estudos da genética de populações na História Pré- Colombiana da América. Arquivos do Museu de Historia Natural, v. 23, p. 56-88 – PDF

COZZUOL et al. 2013 A new species of tapir from the Amazon. Journal of Mammalogy (Print), v. 94, p. 1331-1345 - PDF


ELHAIK et al [Genographic Consortium] 2013 The GenoChip: A New Tool for Genetic Anthropology. Genome Biology and Evolution, p. evt066 - PDF

SANDOVAL et al. 2013 Tracing the Genomic Ancestry of Peruvians Reveals a Major Legacy of Pre-Columbian Ancestors. Journal of Human Genetics (Print), v. 58, p. 2013.73 - PDF

Lu et al [Genographic Consortium] 2013 Genographic Consortium . Genetic evidence for the multiple origins of Pinghua Chinese. Journal of Systematics and Evolution (Print), v. 51, p. 271-279 - PDF

LI et al [Genographic Consortium] 2013 Three phases for the early peopling of Hainan Island viewed from mitochondrial DNA. Journal of Systematics and Evolution (Print), v. 51, p. 671-680 - PDF

VILAÇA e SANTOS 2013 Molecular data for the sea turtle population in Brazil. Dataset Papers in Ecology, v. 2013, p. 196492 - PDF

VILAÇA et al. 2013 Population origin and historical demography in hawksbill (Eretmochelys imbricata) feeding and nesting aggregates from Brazil. Journal of Experimental Marine Biology and Ecology, v. 446, p. 334-344 - PDF

SANDOVAL et al [Genographic Consortium] 2013. The Genetic History of Indigenous Populations of the Peruvian and Bolivian Altiplano: The Legacy of the Uros. Plos One, v. 8, p. e73006 - PDF

BRANDT et al [Genographic Consortium] 2013 Ancient DNA Reveals Key Stages in the Formation of Central European Mitochondrial Genetic Diversity. Science (New York, N.Y.), v. 342, p. 257-261 - PDF

REBALA et al [Genographic Consortium] 2013 Contemporary paternal genetic landscape of Polish and German populations: from early medieval Slavic expansion to post-World War II resettlements. European Journal of Human Genetics, v. 22, p. 415-422 - html

NEMESIO et al 2013 Eufriesea zhangi sp. n. (Hymenoptera: Apidae: Euglossina), a new orchid bee from Brazil revealed by molecular and morphological characters. Zootaxa (Auckland. Print), v. 3609, p. 568-582 - PDF

BADRO et al [Genographic Consortium] 2013 Y-Chromosome and mtDNA Genetics Reveal Significant Contrasts in Affinities of Modern Middle Eastern Populations with European and African Populations. Plos One, v. 8, p. e54616 - PDF

MOLFETTI et al 2013 Recent Demographic History and Present Fine-Scale Structure in the Northwest Atlantic Leatherback (Dermochelys coriacea) Turtle Population. Plos One, v. 8, p. e58061 - PDF

LACORTE et al 2013 Exploring the Diversity and Distribution of Neotropical Avian Malaria Parasites A Molecular Survey from Southeast Brazil. Plos One, v. 8, p. e57770 - PDF

DER SARKISSIAN et al [Genographic Consortium] 2013 Ancient DNA Reveals Prehistoric Gene-Flow from Siberia in the Complex Human Population History of North East Europe. PLOS Genetics, v. 9, p. e1003296 - PDF

BROTHERTON et al [Genographic Consortium] 2013 Neolithic mitochondrial haplogroup H genomes and the genetic origins of Europeans. Nature Communications, v. 4, p. 1764 - PDF

ELHAIK et al [Genographic Consortium] 2013 The GenoChip: A New Tool for Genetic Anthropology. Genome Biology and Evolution, p. evt066 - PDF

BOATTINI et al [Genographic Consortium] 2013 Uniparental Markers in Italy Reveal a Sex-Biased Genetic Structure and Different Historical Strata. Plos One, v. 8, p. e65441 - PDF

CABANNE et al 2013 Matrilineal evidence for demographic expansion, low diversity and lack of phylogeographic structure in the Atlantic forest endemic Greenish Schiffornis Schiffornis virescens (Aves: Tityridae). Journal of Ornithology, v. 154, p. 371-384 - PDF

LI et al [Genographic Consortium] 2013 Substitution of Hainan indigenous genetic lineage in the Utsat people, exiles of the Champa kingdom. Journal of Systematics and Evolution (Print), v. 51, p. 287-294 - PDF

DENG et al [Genographic Consortium] 2013 Genetic affinity between the Kam-Sui speaking Chadong and Mulam people. Journal of Systematics and Evolution (Print), v. 51, p. 263-270 - PDF

WANG et al [Genographic Consortium] 2013 Late Neolithic expansion of ancient Chinese revealed by Y chromosome haplogroup O3a1c-002611. Journal of Systematics and Evolution (Print), v. 51, p. 280-286 - PDF

LU et al [Genographic Consortium] 2013 Genetic evidence for the multiple origins of Pinghua Chinese. Journal of Systematics and Evolution (Print), v. 51, p. 271-279 - PDF

FREITAS et al. 2012 A new species of Cinclodes from the Espinhaço Range, southeastern Brazil: insights into the biogeographic history of the South American highlands. Ibis, v. 154 - PDF

COUTINHO et al. 2012. As dificuldades na compreensão do sistema de teorias evolutivas. Ciência em tela, v5 - PDF

VILAÇA et al. 2012 Nuclear markers reveal a complex introgression pattern among marine turtle species on the Brazilian coast. Molecular Ecology - PDF

CABANNE et al. 2012 Matrilineal evidence for a demographic expansion, low diversity and lack of phylogeographic structure in the Atlantic forest endemic Greenish Schiffornis Schiffornis virescens (Aves: Tityridae). Journal of Ornithology, v. 153, p. 0901-8 - PDF

DULIK et al. 2012 (Genographic) Y-chromosome analysis reveals genetic divergence and new founding native lineages in Athapaskan- and Eskimoan-speaking populations. Proceedings of the National Academy of Sciences of the United States of America, v. 109, p. 8471-8476 - PDF

KANG et al. 2012 (Genographic) Y-chromosome O3 Haplogroup Diversity in Sino-Tibetan Populations Reveals Two Migration Routes into the Eastern Himalayas. Annals of Human Genetics (Print), v. 76, p. 92-99 - PDF

LU et al. 2012 (Genographic)  Mitochondrial origin of the matrilocal Mosuo people in China. MITOCHONDR DNA, v. 23, p. 13-19 - PDF

MARTINEZ-CRUZ et al. 2012b (Genographic) Evidence of pre-Roman tribal genetic structure in Basques from uniparentally inherited markers. Molecular Biology and Evolution, v. 29 - PDF

JAVED et al. 2012 (Genographic)  Recombination networks as genetic markers in a human variation study of the Old World. Human Genetics, v. 131, p. 601-613 - PDF

BEHAR et al. 2012 (Genographic) The Basque Paradigm: Genetic Evidence of a Maternal Continuity in the Franco-Cantabrian Region since Pre-Neolithic Times. American Journal of Human Genetics, v. 90, p. 486-493, 2012 - PDF

SCHURR et al. 2012 (Genographic) Clan, language, and migration history has shaped genetic diversity in Haida and Tlingit populations from Southeast Alaska. AJPA, v. 148, p. 422-435 - PDF

DULIK et al. 2012 (Genographic) Y-chromosome analysis reveals genetic divergence and new founding native lineages in Athapaskan- and Eskimoan-speaking populations. PNAS, v. 109, p. 8471-8476 - PDF

MARTINEZ-CRUZ et al. 2012a (Genographic) Y-Chromosome Analysis in Individuals Bearing the Basarab Name of the First Dynasty of Wallachian Kings. Plos One, v. 7, p. e41803 - PDF

MARTINS et al. 2012 Microsatellite markers for Vellozia gigantea (Velloziaceae), a narrowly endemic species to the Brazilian campos rupestres. American Journal of Botany, v. 99 - PDF

HABER et al. 2012 (Genographic) Afghanistan’s Ethnic Groups Share a Y-Chromosomal Heritage Structured by Historical Events. Plos One - PDF

SOUZA et al. 2012. Development of microsatellite markers for Dimorphandra molis. Am J Bot - PDF

MELÉ et al. 2012. (Genographic) Recombination gives a new insight in the effective population size and the history of the Old World human populations. Mol Biol Evol - PDF

VILAÇA et al. 2011. Remaining genetic diversity in Brazilian Merganser (Mergus octosetaceus). Cons Genet - PDF

ADLER et al. 2011. (Genographic) Survival and recovery of DNA from ancient teeth and bones. J Arch Sc - PDF

MARTINEZ-CRUZ et al. 2011. (Genographic) Multiplex single-nucleotide polymorphism typing of the human Y chromosome using TaqMan probes. Inv Genet - PDF

YAN et al. 2011. (Genographic) An updated tree of Y-chromosome Haplogroup O and revised phylogenetic positions of mutations P164 and PK4. Eur J Genet - PDF

YANG et al. 2011. (Genographic) Positive selection on mitochondrial M7 lineages among the Gelong people in Hainan. J Hum Genet - PDF

BALANOVSKY et al. 2011. (Genographic) Parallel Evolution of Genes and Languages in the Caucasus Region. Mol Biol Evol - PDF

CAI et al. 2011. (Genographic) Human Migration through Bottlenecks from Southeast Asia into East Asia during Last Glacial Maximum Revealed by Y Chromosomes. Plos One - PDF

GAIESK et al. 2011. (Genographic) Genetic Ancestry and Indigenous Heritage in a Native American Descendant Community in Bermuda. Am J Phys Anth. - PDF

JOTA et al. 2011. A New Subhaplogroup of Native American Y-chromosomes from the Andes. Am J Phys Anth. - PDF

BISSO-MACHADO et al. 2011. Distribution of Y-Chromosome Q Lineages in Native Americans. Am J Hum Biol 23:563–566 - PDF

HOLLATZ et al. 2011. The Amazon River system as an ecological barrier driving genetic differentiation of the pink dolphin (Inia geoffrensis). Biol J Linn Soc - PDF

HOLLATZ et al. 2011. Microsatellite data reveal fine genetic structure in male Guiana dolphins (Sotalia guianesis) in two geographically close embayments at south-eastern coast of Brazil. Mar. Biol. - PDF

PAVAN et al. 2011. Historical forest fragmentation and species diversification: the case of the Shorttailed fruit bat Carollia perspicillata (Chiroptera: Phyllostomidae). Biol J Linn Soc 102, 527–539 - PDF

RUIZ et al. 2011. Evidence for Reductive Genome Evolution and Lateral Acquisition of Virulence Functions in Two Corynebacterium pseudotuberculosis Strains. Plos One 6(4): e18551 - PDF

COSTA et al. 2011. Chromobacterium sp. from the tropics: detection and diversity of phytase activity. Br J Mic. - PDF

LIMA-BITTENCOURT C et al. 2011. Comparative biogeography of Chromobacterium from the neotropics. Antonie van Leeuwenhoek (Gedrukt). - PDF

HABER et al (Genographic) 2011 Influences of history, geography, and religion on genetic structure: the Maronites in Lebanon. Eur J Hum Genet. 19(3):334-340 - PDF

MELÉ et al (Genographic) 2010. A new method to reconstruct recombination events at a genomic scale. PLoS Comput Biol. 24;6(11):e1001010. - PDF

HAAK et al (Genographic) 2010. Ancient DNA from European early neolithic farmers reveals their near eastern affinities. PLoS Biol. 2010 Nov 9;8(11):e1000536 - PDF

SANTOS et al. 2010. Implicaciones bioéticas de los estudios de genética histórica: el caso del Proyecto Genográfico. Cuadernos de Bioética (Buenos Aires), v15/16: 115-129 - PDF

ZHADANOV et al. 2010 Genetic Heritage and Native Identity of the Seaconke Wampanoag Tribe of Massachusetts. American Journal of Physical Anthropology, v. 142:579-589 - PDF

VILAÇA ST, SANTOS FR  2010. Biogeographic history of the species complex Basileuterus culicivorus (Aves, Parulidae) in the Neotropics. Molecular Phylogenetics and Evolution (Print), v. 56, p. 10.1016. - PDF

QIN Z et al. 2010. (Genographic) A mitochondrial revelation of early human migrations to the Tibetan Plateau before and after the last glacial maximum. American Journal of Physical Anthropology. - PDF

CABALLERO et al. 2010b Initial description of major histocompatibility complex variation at two class ii loci (DQA-DQB) in Sotalia fluviatilis and Sotalia guianensis. LAJAM 8 - PDF

CABALLERO et al. 2010a - Mitochondrial DNA diversity, differentiation and phylogeography of the South American riverine and coastal dolphins Sotalia fluviatilis and S. guianensis LAJAM 8: 69-79- PDF

REIS EC et al. 2010 Genetic composition, population structure and phylogeography of the loggerhead sea turtle: colonization hypothesis for the Brazilian rookeries. Conservation Genetics: 11 - PDF

FREITAS G et al. 2009 Nova área de ocorrência da espécie ameaçada Coryphaspiza melanotis (Aves: Emberizidae) em Minas Gerais. MG-Biota - PDF

VARGAS SM et al. 2009. DNA barcoding of Brazilian sea turtles (TESTUDINES). Gen Mol Biol - PDF

MARTINS RP et al. 2009 A mal compreendida Evolução. Ciência Hoje: 45: 74-75 - PDF

DANTAS G et al. 2009. Sex ratio and morphological characteristics of Rufuos Gnateaters, Conopophaga lineata (Aves, Passeriformes) in Atlantic forest fragments. Inheringia - PDF

PONTES DR et al. 2009. Multiple Antimicrobial Resistance of Gram-Negative Bacteria from Natural Oligotrophic Lakes Under Distinct Anthropogenic Influence in a Tropical Region. Environ Microb - PDF

PARIDA L et al. (Genographic) 2009 Minimizing recombinations in consensus networks for phylogeographic studies. BMC Bioinformatics: 10, S72 - PDF

EL-SIBAI M et al. (Genographic) 2009 Geographical structure of the Y-chromosomal genetic landscape of the Levant: a coastal-inland contrast. Annals of Human Genetics 73: 568-581 - PDF

REDONDO RAF et al. 2008. Molecular systematics of the genus Artibeus (CHIROPTERA: PHYLLOSTOMIDAE). Molecular Phylogenetics and Evolution: 49: 44-58 - PDF

DINIZ-FILHO JA et al. 2008 Mapping the evolutionary twilight zone: molecular markers, populations and geography. J Biogeogr: 35: 753-763 - PDF

PARIDA L  et al. (Genographic) 2008. Estimating the Ancestral Recombinations Graph (ARG) as Compatible Networks of SNP Patterns. Journal of Computational Biology: 15:1133-1154 - PDF

ROSSET S et al. (Genographic) 2008. Maximum Likelihood Estimation of Site-Specific Mutation Rates in Human Mitochondrial DNA from Partial Phylogenetic Classification'. Genetics (Austin): 180: 1511-1524 - PDF

CABANNE G et al. 2008. Nuclear and mitochondrial phylogeography of the Atlantic forest endemic Xiphorhynchus fuscus (Aves: Dendrocolaptidae): biogeography and systematics iimplications. Molecular Phylogenetics and Evolution: 49: 760-773 - PDF

ZALLOUA P et al. (Genographic) 2008. Identifying genetic traces of historical expansions: Phoenician footprints in the Mediterranean. Am J Hum Gen: 83: 633-642 - PDF

ZALLOUA P et al. (Genographic) 2008 Y-chromosomal diversity in Lebanon is structured by recent historical events. Am J Hum Genet: 82: 873-882 - PDF

GONZÁLEZ-JOSÉ et al. 2008 The Peopling of America: Craniofacial Shape Variation on a Continental Scale and its Interpretation from an Interdisciplinary View. Am J Phys Anthr, 137: 175-187 - PDF

CHAVES AV et al. 2008 Molecular Taxonomy of Brazilian Tyrant-Flycatchers (Passeriformes: Tyrannidae). Mol Ecol Res v. 8: 1169-1177 - PDF

LARA-RUIZ P et al. 2008 Extreme population divergence and conservation implications for the rare endangered Atlantic Forest sloth, Bradypus torquatus (Pilosa: Bradypodidae). Biological Conservation: 141: 1332-1342 - PDF

BEHAR DM et al. (Genographic) 2008 The Dawn of Human Matrilineal Diversity. American Journal of Human Genetics: 82: 1130-1140 - PDF

BEHAR DM et al. (Genographic) 2008. A Novel 154 bp Deletion in the Human Mitochondrial DNA Control Region in Healthy individuals. Human Mutation: 29: 1387-1391 - PDF

GAN R-J et al. (Genographic) (Genographic) 2008 Pinghua population as an exception of Han Chinese's coherent genetic structure. Journal of Human Genetics: 53: 303-313 - PDF

VARGAS SM et al. 2008 Genetic diversity and origin of leatherback turtles (Dermochelys coriacea) from the Brazilian coast. Journal of Heredity: 99: 215-220 - PDF

RIBEIRO BA et al. 2007 Sex-biased help and possible facultative control over offspring sex ratio in the Rufous-fronted Thornbird, Phacellodomus rufifrons. Ararajuba. Revista Brasileira de Ornitologia: 15: 561-568 - PDF

Lima-Bittencourt CI et al. 2007 Analysis of Chromobacterium sp. natural isolates from different Brazilian ecosystems. BMC Microbiology: 7: 10.1186 - PDF

Ribeiro RA et al. 2007 The Genus Machaerium (Leguminosae) is more closely related to Aeschynomene Sect. Ochopodium than to Dalbergia: Inferences from combined sequence data. Systematic Botany: 32: 762-771 - PDF

Behar DM et al. (Genographic) 2007 The Genographic Project Public Participation Mitochondrial DNA Database. PLOS Genetics: 3: 1083-1095 - PDF

Ramos ACS et al. 2007 Phylogeography of the tree Hymenaea stigonocarpa (Fabaceae: Caesalpinioideae) and theinfluence of Quaternary climate changes in the Brazilian Cerrado. Annals of Botany: 100: 1-10 - PDF

Garcia DM et al. 2007 Conservation genetics of the giant otter (Pteronura brasiliensis) (Carnivora, Mustelidae). Brazilian Journal of Biology: 67: 819-827 - PDF

Dantas G et al. 2007 Genetic variability of Conopophaga lineata (Conopophagidae) in Atlantic Forest fragments. Brazilian Journal of Biology: 67: 641-645 - PDF

Lacerda DR et al. 2007 Mitochondrial DNA corroborates the species distinctiveness of the Planalto (Thamnophilus pelzelni) and the Sooretama (T. ambiguus) Slaty-antshrikes (Passeriformes: Thamnophilidae). Brazilian Journal of Biology: 67: 872-882 - PDF

Cabanne G, Santos FR, Miyaki C 2007 Phylogeography of Xiphorhynchus fuscus (Passeriformes: Dendrocolaptidae): vicariance and recent demographic expansion in the southern Atlantic forest. Biol J Linnaean Soc. 91:73-84 - PDF

Caballero S, ... Santos FR, Baker CS 2007 Taxonomic status of fhe genus Sotalia: species level ranking for Tucuxi (Sotalia fluviatilis) and Costero (Sotalia guianensis) dolphins. Mar Mamm Sci 23:358-386 - PDF

Vilaça ST, Lacerda DR, Saria EH, Santos FR 2006 DNA-based identification applied to Thamnophilidae (Passeriformes) species: the first barcodes of Neotropical birds. Rev Bras Ornit. 14:7-13 - PDF

Lara-Ruiz PR, FR Santos, Soares LS 2006 Extensive hybridization in hawksbill turtles (Eretmochelys imbricata) nesting in Brazil revealed by mtDNA analyses. Cons Genetics 7:773-781 - PDF

Carvalho CMB, ... FR Santos, Pena SD 2006 No association found between gr/gr deletions and infertility in Brazilian males. Mol Hum Reprod. 12:269-273 - PDF

Vianna JA et al. 2006 Conservação das espécies de peixe-boi no Brasil. Ciência Hoje, Rio de Janeiro, RJ: 230: 32-37 - PDF

Carvalho CMB, ... Pena SD, FR Santos 2006 Study of AZFc partial deletion gr/gr in fertile and infertile Japanese males. J Hum Genet. 51:794-799 - PDF

Redondo RAF, FR Santos 2006 Evolutionary studies on alpha-amylase gene segment in bats and other mammals. Genetica 126:199-213 - PDF

Carvalho-Silva DR, ... Pena SD, FR Santos 2006 Y Chromosome diversity in Brazilians: switching perspectives from slow to fast evolving markers. Genetica 126: 251-260 - PDF

Vianna JA, ... FR Santos 2006 Phylogeography, phylogeny and hybridization in trichechid sirenians: Implications for manatee conservation. Mol Ecology 15:433-447 - PDF

Tyler-Smith C, K Howe K, FR Santos 2006 The rise and fall of the ape Y chromosome. Nature Genetics 38:141-143 - PDF

Carvalho CMB, FR Santos 2005 Human Y-chromosome variation and male dysfunction. J Mol Gen Med. 1:63-75 - PDF

Ruiz-Narváez EA, FR Santos, .. SDJ Pena 2005 Genetic variation of the Y-chromosome in Chibcha-speaking Amerindians of Costa Rica and Panama. Hum Biology 77:71-91 - PDF

Gregório SP, .., FR Santos, E Dias Neto 2005 Nogo CAA 3'UTR Insertion polymorphism is not associated with Schizophrenia nor with bipolar disorder. Schizophrenia Research 75:5-9 - PDF

Vasconcelos ATR, ..FR Santos, A Zaha 2005 Swine and poultry pathogens: the complete genome sequences of two strains of Mycoplasma hyopneumoniae and a strain of Mycoplasma synoviae. J Bacteriology 187:5568-5577 - PDF

Santos FR, DR Lacerda, RAF Redondo 2004 Tecnologias Genômicas na Conservação da Biodiversidade. Bioscience Journal, 20(especial):79-92 - PDF

Santos FR 2004. Biotecnologia aplicada à preservação de espécies silvestres. Ação Ambiental 1(29):19-22  - PDF

Lara-Ruiz PR, FR Santos, A Chiarello 2004 Morphological and genetic variability in maned sloths, Bradypus torquatus (Xenarthra: Bradypodidae). Edentata 6:54-55  - PDF

Santos FR 2004 The Precolumbian peopling of America: by the Y chromosome. Anais do Congresso ALAB 2004. Caracas, Venezuela

Carvalho CMB,..., Santos FR, Pena SD 2004 Y chromosome haplotypes in azoospermic Israli men. Hum Biol 76:467-478 - PDF

Coia V,..., Santos FR
, Tyler-Smith 2004 Binary and microsatellite polymorphisms of the Y-chromosome in the Mbenzele Pygmies from the Central African Republic. Am J Hum Biol 16:57-67 - PDF

Brito CF,..., Santos FR, Teixeira SM 2004 Chromobacterium violaceum genome: molecular mechanisms associated with pathogenicity. Gen Mol Res 3:148-161 - PDF

Vasconcelos AT,..., Santos FR, Simpson AJG 2003 The complete genome sequence of Chromobacterium violaceum reveals remarkable and exploitable bacterial adaptability. PNAS 100: 11660-11665 - PDF

Carvalho CMB,..., Santos FR 2003 Lack of Association Between Y Chromosome Haplogroups and Male Infertility in Japanese Men. Am J Med Genet 116:152-158   -  PDF

Santos FR, Guimarães PEM and Redondo RAF 2002 Bancos de DNA: coleções estratégicas para estudos da biodiversidade. Lundiana 3:93-98 - PDF

Tarazona-Santos E & Santos FR 2002 The peopling of the americas: a second major migration? Am J Hum Genet 70:1377-1380   -  PDF

The YCC consortium 2002 A nomenclature system for the tree of human Y-chromosomal binary haplogroups. Genome Research. 12:339-448 - PDF

Tarazona-Santos E, ..., Santos FR 2001 Reply to Rothhammer and Moraga. Am J Hum Genet 69:904-906   -  PDF

Tarazona-Santos E, ..., Santos FR 2001 Genetic Differentiation in South Amerindians Is Related to Environmental and Cultural Diversity: Evidence from the Y Chromosome. Am J Hum Genet 68:1485-1496  -  PDF

Carvalho-Silva DR, Santos FR, Rocha JL, Pena SDJ 2001 The phylogeography of Brazilian Y-chromosome lineages.  Am J Hum Genet 68:281-286   - PDF

Santos FR et al. 2000 A polymorphic L1 retroposon insertion in the centromere of the human Y chromosome. Hum Mol Genet 9:421-430   - PDF

Pena SDJ, Santos FR 2000  L'origine des Amérindiens. Pour la Science 277:82-85

Pena SDJ, Santos FR 2000  La origen de los Amerindios. Investigación y Ciencia 287:48-54

Rosser ZH, ..., Santos FR et al. 2000  Y-chromosomal diversity within Europe is clinal and influenced primarily by geography rather than language Am J Hum Genet 67:1526-1543 - PDF

Pena SDJ, Carvalho-Silva DR, Alves-Silva J, Prado VF, Santos FR 2000 O Retrato Molecular do Brasil. Ciência Hoje, abril de 2000 - PDF

Zerjal T,..., Santos FR et al. 1999 The Use of Y-Chromosomal DNA Variation to Investigate Population History: Recent Male Spread in Asia and Europe. pages 91-101. In: Surinder Singh Papiha; Ranjan Deka; Ranajit Chakraborty, Genome Diversity

Hurles M,..., Santos FR et al. 1999 Recent male-mediated gene flow over a linguistic barrier in Iberia suggested by analysis of a Y-chromosomal DNA polymorphism. Am J Hum Genet 65, 1437-1448   -  PDF

Bosch E, ..., Santos FR et al. 1999 Variation in Short Tandem Repeats Is Deeply Structured by Genetic Background on the Human Y Chromosome. Am J Hum Genet. 65, 1623-1638   -    PDF

Santos FR, Carvalho-Silva DR, Pena  SDJ  1999 PCR-based DNA profiling of human Y chromosomes, pages 133-152; In: Epplen JT; Lubjuhn T, Methods and Tools in Biosciences and Medicine [Basel - Suiça] Birkhauser Verlag - PDF

Carvalho-Silva DR, Santos FR et al. 1999 Divergent human Y chromosome microsatellite evolution rates. Journal of Molecular Evolution 49:204-214   -    PDF

Santos FR et al.  1999 The Central Siberian Origin for Native American Y-chromosomes. Am.J.Hum.Genet. 64:619-628   -    PDF

Hurles ME, Irven C, Nicholson J, Taylor PG, Santos FR, et al   1998 European Y-Chromosomal Lineages in Polynesians: A contrast to the population structure revealed by mtDNA. Am.J.Hum.Genet. 63:1793-1806 -  PDF

Santos FR, Pandya A, Tyler-Smith 1998 Reliability of DNA based sex tests. Nature Genet. 18:103 - PDF

Tyler-Smith C, Pandya A, Santos FR 1998 A bright future for the human past. Trends in Genet. 14:7-8

Pandya A, Santos FR et al. 1998 A polymorphic human Y-chromosomal G to A transition found in India. Indian J Hum Genet. 4:52-61 - PDF

Pena SDJ, Carvalho-Silva DR, Santos FR 1997 Utilização de polimorfismos do cromossomo Y no estudo do povoamento das Américas. Revista USP 34:44-57

Zerjal T, Dashnyam B, Pandya A, Kayser M, Rower L, Santos FR et al. 1997 Genetic relationships of Asians and northern Europeans revealed by Y-chromosomal DNA analysis. Am.J.Hum.Genet. 60:1174-1183 - PDF

Santos FR and Tyler-Smith C 1996 Reading the human Y chromosome: the emerging DNA markers and human genetic history. Braz. J. Genet. 19:665-670 - PDF

Santos FR et al. 1996 Worldwide distribution of human Y-chromosome haplotypes. Genome Res. 6:601-611 - PDF

Santos FR et al. 1996 North and South Amerindians may have the same major founder Y chromosome haplotype. Am. J. Hum. Genet. 58:1369-1370 - PDF

Santos FR et al. 1996 Geographic differences in the allele frequencies of the human Y-linked tetranucleotide polymorphism DYS19. Hum. Genet. 97:309-313 - PDF

Santos FR et al. 1995 PCR haplotypes for the human Y chromosome based on alphoid satellite DNA variants and heteroduplex analysis. Gene 165, 191-198 - PDF

Santos FR et al. 1995 Further evidence for the existence of major founder Y chromosome haplotype in Amerindians. Braz J Genet. 18:669-672

Pena SD, Santos FR et al. 1995 A major founder Y-chromosome haplotype in Amerindians. Nature Genet. 11:15-16 - PDF

Dias Neto E, Santos FR et al. 1993 Sex determination by low stringency PCR (LS-PCR). Nucleic Acids Res. 21:763-764 - PDF

Santos FR et al. 1993 Testing deficiency paternity cases with a Y-linked tetranucleotide repeat polymorphism. EXS 67:261-265

Santos FR et al. 1993 Genetic and population study of a Y-linked tetranucleotide repeat DNA polymorphism with a simple non-isotopic technique. Hum. Genet. 90:655-656 - PDF


Divulgation

SANTOR FR 2015 Human Migration and Population Analysis McGraw-Hill 2014 Yearbook - PDF

SANTOS FR 2014 A grande árvore genealógica humana. Revista da Universidade Federal de Minas Gerais, v. 21, p. 88-113 – PDF

SANTOS FR 2014 Evolução Humana: uma História de Ossos e DNA. Ciência & Ambiente, v. 48, p. 43-65 – PDF


Prosdocimi F, Santos FR 2004 Sobre bioinformática, genoma e ciência - Ciência Hoje, outubro de 2004

Santos FR 2004
A lei de biossegurança e o uso das células tronco embrionárias - Boletim da UFMG - 21/10/2004

Santos FR 2003
Pesquisador comenta artigo 'Sobre homens e macacos', de Geraldo Luís Lino - Jornal da Ciência 2290 - 02/06/2003

Santos FR 2002 Clones Humanos? - Boletim da UFMG - 16/05/2002


Santos FR 2001 Debate sobre Genoma continua entre leitores - Jornal da Ciência 1717 - 29/01/2001

Santos FR 2001 Leitor contesta artigo de Eloi Garcia - Genoma, uma bofetada na evolução -  Jornal da Ciência 1713 - 23/01/2001

Santos FR 2000 Contra a biopirataria no Brasil - Jornal da Ciência 1560 - 12/06/2000

Santos FR 2000 É possível usar o DNA como ferramenta para reconhecer diferenças entre animais da mesma espécie? Ciência Hoje, setembro de 2000

Santos FR, Ribeiro SP, Martins RP 1999 Os riscos ambientais dos transgênicos -  artigo no Jornal da Ciência - SBPC e no Boletim da UFMG

Santos FR  1998 Por que os geneticistas têm tanto interesse em estudar o sangue de populações primitivas? Ciência Hoje, julho de 1998

Página com Reportagens sobre a produção científica  do LBEM
 


Books, Chapters, Preprints and other Scientific Texts

    Books

Biotecnologia Simplificada (2001 - 2003 2a ed.) - Borém A, Santos FR

Understanding Biotechnology (2003) - Borém A, Santos FR, Bowen D

Biotecnologia de A a Z (2003) - Borém A, Santos FR, Almeida M (organizadores)

Understanding Biotechnology - versão em chinês (2003) - Borém A, Santos FR, Bowen D

    Chapter
s

Metabolic Imperative: Deep Gaps in Western Culture Concerning Our Dependence on the Environment. Romeu Cardoso Guimarães - Preprint

Vital flow: The Self-Organization stage - PDF -
Romeu C. Guimarães In: Systemics, Self-Organization and Information, Eds. Alfredo Pereira Jr, William Pickering, Ricardo Gudwin. Routledge UK, 2019

THE DYNAMICS OF THE LIVING - PDF - Romeu C. Guimarães In: Systemics, Self-Organization and Information, Eds. Alfredo Pereira Jr, Chris Nunn, William Pickering, Ricardo Gudwin. Submitted to Routledge UK, November 2017

ROOTS OF COMPLEXITY IN THE SELF-REFERENTIAL GENETIC CODE - PDF - Romeu C. Guimarães In: Systemics, Self-Organization and Information, Eds. Alfredo Pereira Jr, Chris Nunn, William Pickering, Ricardo Gudwin. Submitted to Routledge UK, November 2017

PERMANÊNCIA E LIBERDADE EM TENSÃO -
Direitos e Fundamentos entre Vida e Arte (2010) Romeu C. Guimarães - PDF

Genética dos Sirênios - Santos et al 2016 PDF

Sirenian Genetics and Demography Parr et al. 2011 PDF

Diversidade Genética - Diagnóstico do Biota Minas (2009) - Santos et al. - PDF

Genética de Populações Humanas (2004) - Genômica - Santos FR, Bonatto SL

Biotecnologia aplicada à conservação de espécies silvestres (2003) - Biotecnologia de A a Z - Santos FR, Redondo RAF

Bioinformática Genômica (2003) - Melhoramento Genômico -  Santos FR, Ortega JM

Genômica (2003) - Melhoramento Genômico - Borém A, Santos FR

A história do povoamento pré-colombiano das Américas e o cromossomo Y humano (2002) - Homo brasilis - Santos FR, Tarazona E


Retrato Molecular do Brasil (2001) - O imperador das idéias - Pena SDJ, Carvalho DR, Silva JA, Prado V, Santos FR


PCR-Based Dna Profiling Of Human Y Chromosomes (1999) - Methods and Tools in Biosciences and Medicine - Santos FR, Carvalho DR, Pena SDJ


The Use of Y-Chromosomal DNA Variation to Investigate Population History: Recent Male Spread in Asia and Europe (1998) - Genomic Diversity - Zerjal T, Santos FR, Tyler-Smith C.

Guimarães RC. Formation of the Genetic Code. Update November 2012
- PDF



PhD Thesis

Polimorfismos do Cromossomo Y Humano: Aplicações em Testes de Identidade e Evolução Humana

abstract in english , resumo em português


 
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